(September 2024) Two more duranensis genomes with alignments

Posted on 13 September 2024

Genomes with alignments for duranensis K30060 and K30065

Two new Arachis duranensis genomes, K30060 and K30065
K30060: This accession is one of the closest identified to A. hypogaea. The genome assembly is avaialable at our DataStore.
K30065: The assembly files for this accession are also available at the dataStore here.

Genome alignments with K30060 and K30065 strains of dueanensis
Available alignments to date are listed below and are accessible from our

• Genome page under section Genome Browsers,
• Species page under each of the species/strains resources as JBrowse links and in
• DataStore genome_alignment files under each of the species directories.
  Links to dotplot view of specific alignments in JBrowse:
• Between these two strains
  JBrowse2 aradu.K30060.gnm1.x.aradu.K30065.gnm1.LXVF.paf.gz : JBrowse2 Dotplot View
• Against Aradu 140167
  JBrowse2 aradu.V14167.gnm2.x.aradu.K30060.gnm1.96TT.paf.gz : JBrowse2 Dotplot View JBrowse2 aradu.V14167.gnm2.x.aradu.K30065.gnm1.96TT.paf.gz: JBrowse2 Dotplot View
• Against Arahy(Tiffrunner)
  JBrowse2 arahy.Tifrunner.gnm2.x.aradu.K30060.gnm1.DWM1.paf.gz : JBrowse2 Dotplot View JBrowse2 arahy.Tifrunner.gnm2.x.aradu.K30065.gnm1.DWM1.paf.gz : JBrowse2 Dotplot View
• Against Araip K30076
  JBrowse2 araip.K30076.gnm2.x.aradu.K30060.gnm1.08ZF.paf.gz : JBrowse2 Dotplot View JBrowse2 araip.K30076.gnm2.x.aradu.K30065.gnm1.08ZF.paf.gz : JBrowse2 Dotplot View